晶体数据审稿意见-对无序处理和精修进行描述 案例来源:CCDC[1] 2281927‒2281938,2379639. CrystEngComm 2024, 26, 5309–5313. DOI[2]: 10.1039/d4ce00853g. 审稿意见: Please provide detailed information on how to refine disorderedmolecules (including site occupancy factors of the disordered atoms/molecules. 大意: 请提供如何精修无序分子的详细信息(包括无序原子/分子的位置占有因子)。 例如对于CCDC 2281935结构,如图1所示(由Olex2[3]呈现),其中的碘做了三组分无序(I1、I1A和I1B),其组分比例为0.871:0.4234:0.08667,于是可以在支持材料中添加描述“I1, I1Aand I1B were disordered over three sites with occupancies 0.871:0.042:0.087.”(见图3)。 ▲图1 CCDC 2281935结构无序情况 对于CCDC 2281931结构,如图2所示,两个1,2,4,5-tetrafluoro-3,6-diiodobenzene分子存在二组分无序,其组分比例分别为0.68673:(1‒0.68673)和0.41826:(1‒0.41826),即0.68673:0.31327和0.41826:0.58174,于是可以可以在支持材料中添加描述“1,2,4,5-tetrafluoro-3,6-diiodobenzenewas disordered. C1~C6, F1~F4, I1~I2 and C1A~C6A, F1A~F4A, I1A~I2A aredisordered over two sites with occupancies 0.418:0.582, and C7~C12, F5~F8,I3~I4 and C7A~C12A, F5A~F8A, I3A~I4A are disordered over two sites withoccupancies 0.687:0.313.”(见图3)。 ▲图2 CCDC 2281931结构无序情况 其他结构无序精修描述类似,此处不再赘述,见图3。
▲图3 支持材料中无序精修描述 视频讲解请参阅: 晶体数据审稿意见-对无序处理和精修进行描述:https://www.bilibili.com/video/BV1yKBWYrEL5 相关推文: 参考文献 [1] (a) Allen, F. H. The Cambridge StructuralDatabase: A Quarter of a Million Crystal Structures and Rising. Acta Cryst. 2002, B58, 380–388. DOI: 10.1107/S0108768102003890. (b) Groom, C. R.;Bruno, I. J.; Lightfoot, M. P.; Ward, S. C. The Cambridge Structural Database. Acta Cryst. 2016, B72, 171–179. DOI: 10.1107/S2052520616003954. (c) Mitchell, J.;Robertson, J. H.; Raithby, P. R. Cambridge Crystallographic Data Centre (CCDC).Comprehensive Coordination Chemistry III2021, 413–437. DOI: 10.1016/B978-0-12-409547-2.14829-2. [2] (a) International Organization forStandardization (2012). ISO 26324:2012. Informationand Documentation – Digital Object Identifier System. http://www.iso.org/iso/catalogue_detail.htm?csnumber=43506. (b) McDonald J. D.;Levine-Clark, M. Encyclopedia of Libraryand Information Sciences. Fourth Edition, CRC Press, 2017. DOI: 10.1081/e-elis4. (c) Liu, J. Digital ObjectIdentifier (DOI) and DOI Services: An Overview. Libri 2021, 71, 349‒360. DOI:10.1515/libri-2020-0018. (d) International Organization forStandardization (2022). ISO 26324:2022. Informationand Documentation – Digital Object Identifier System. https://www.iso.org/standard/81599.html[3] Dolomanov, O. V.; Bourhis, L. J.; Gildea, R.J.; Howard, J. A. K.; Puschmann, H. OLEX2:A Complete Structure Solution, Refinement and Analysis Program. J. Appl. Cryst.2009, 42, 339–341. DOI:10.1107/S0021889808042726. 声明:本文仅代表个人观点,笔者学识有限,资料整理过程中可能存在疏漏错误,请不吝指正。 如需PDF文档,请从以下链接下载: 通过网盘分享的文件:晶体数据审稿意见-对无序处理和精修进行描述.pdf
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